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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11899349_11900548_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11899349 - 11900548

Intron Length:

1200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTATTAATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTATTAATT

Flanking Amino Acid:

SESPERRKSEDEDSDSDSD*

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

83.2

30.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.8

0.72

0.9

79.1

38.1

Minor 5ss

33.6

-1.9

41.3

45.3

Minor BPS

71.1

0.74

1.5

85.74

Associated Gene:

Gene:

CMTM3

Ensembl Gene ID:

ENSAPLG00000014361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014973

11899320 - 11912997

13678