Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_11918985_11920395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11918985 - 11920395

Intron Length:

1411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGGAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTAATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

DYFAQTTNIEVLTEPVNKWR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

39.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

73.1

0.52

1.1

81.1

34.5

Minor 5ss

29.9

-2.3

3.8

46.5

48.8

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

TK2

Ensembl Gene ID:

ENSAPLG00000030486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037439

11917019 - 11923661

6643