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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11959039_11963955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11959039 - 11963955

Intron Length:

4917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATTAT

U12 Branch Point Sequence:

AAAGCAAGAATT

Flanking Amino Acid:

HPHQRRDAVYAPDGFSYGGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

59.2

0.23

1.3

43.5

Major PPT

81.6

0.71

0.9

72.6

42.4

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

41.8

-0.5

1.9

56.13

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015080

11942710 - 11965773

23064