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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12019704_12020472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12019704 - 12020472

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

CTGTTTACAATT

Flanking Amino Acid:

AIFVCIFTIIVIALLILLRK

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

84.4

29.2

Major BPS

73.5

0.59

81.3

29.9

Major PPT

83.5

0.75

0.9

77.3

Minor 5ss

42.3

-0.8

2.9

45.5

Minor BPS

-0.1

1.8

63.93

41.4

Associated Gene:

Gene:

CDH5

Ensembl Gene ID:

ENSAPLG00000014485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015184

12019210 - 12030592

11383

ENSAPLT00000044345

12019210 - 12030604

11395