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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12020719_12021002_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12020719 - 12021002

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATGTAT

5'SS Class:

major

3'SS Sequence:

TTACTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TATCACTTAATT

Flanking Amino Acid:

DSNFSLVENHDNTANITVKY

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

68.8

38.3

Major BPS

78.2

0.7

77.9

32.1

Major PPT

82.1

0.72

0.8

74.1

36.5

Minor 5ss

-1.2

3.4

56.3

47.9

Minor BPS

71.4

0.75

1.4

84.2

35.8

Associated Gene:

Gene:

CDH5

Ensembl Gene ID:

ENSAPLG00000014485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015184

12019210 - 12030592

11383

ENSAPLT00000044345

12019210 - 12030604

11395