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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12021112_12022212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12021112 - 12022212

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

CTTACCTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TCCATCTTACCT

Flanking Amino Acid:

RVCENAAPGKVIIRISATDK

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

78.6

0.64

0.8

72.6

32.1

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

57.6

0.32

1.7

71.55

45.6

Associated Gene:

Gene:

CDH5

Ensembl Gene ID:

ENSAPLG00000014485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044345

12019210 - 12030604

11395

ENSAPLT00000015184

12019210 - 12030592

11383