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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12022338_12023128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12022338 - 12023128

Intron Length:

791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

TGTCTCAGAGAC

Flanking Amino Acid:

TVAAQEILEDGRLSDRESHA

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

80.7

0.69

0.8

31.7

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

40.8

-0.7

1.8

52.17

37.9

Associated Gene:

Gene:

CDH5

Ensembl Gene ID:

ENSAPLG00000014485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015184

12019210 - 12030592

11383

ENSAPLT00000044345

12019210 - 12030604

11395