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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12023272_12023843_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12023272 - 12023843

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAA

5'SS Class:

major

3'SS Sequence:

AAACAAAAAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTTTTAAACA

Flanking Amino Acid:

YDPDAAKRKIRFVRRKASPN

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

67.8

39.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

47.4

-0.1

1.1

34.8

37.8

Minor 5ss

36.8

-1.5

3.1

47.7

Minor BPS

64.7

0.46

1.6

73.92

38.7

Associated Gene:

Gene:

CDH5

Ensembl Gene ID:

ENSAPLG00000014485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044345

12019210 - 12030604

11395

ENSAPLT00000015184

12019210 - 12030592

11383