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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12024098_12025817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12024098 - 12025817

Intron Length:

1720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTTTC

5'SS Class:

major

3'SS Sequence:

ATCTTTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CTCTGTTTATCT

Flanking Amino Acid:

TNEGIIRPKKPLDFEKVAEY

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

75.3

35.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.3

0.7

0.8

36.1

Minor 5ss

43.8

-0.7

61.8

Minor BPS

50.7

0.1

2.1

70.73

46.8

Associated Gene:

Gene:

CDH5

Ensembl Gene ID:

ENSAPLG00000014485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044345

12019210 - 12030604

11395

ENSAPLT00000015184

12019210 - 12030592

11383