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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12026006_12026411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12026006 - 12026411

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

INDNFPVFKHQSFHFKVPEN

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

78.4

37.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

90.7

0.92

0.7

88.7

26.8

Minor 5ss

41.2

-1

2.8

41.5

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

CDH5

Ensembl Gene ID:

ENSAPLG00000014485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044345

12019210 - 12030604

11395

ENSAPLT00000015184

12019210 - 12030592

11383