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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12026577_12027550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12026577 - 12027550

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTCAG

5'SS Class:

major

3'SS Sequence:

TTATATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TCATATTCAACA

Flanking Amino Acid:

GDEYFTVDDSGVIFTTRADL

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

60.1

46.2

Major BPS

0.82

0.8

83.9

25.3

Major PPT

75.4

0.57

1.1

79.7

37.5

Minor 5ss

32.7

-2

3.2

45.3

Minor BPS

54.6

0.14

1.7

65.45

40.8

Associated Gene:

Gene:

CDH5

Ensembl Gene ID:

ENSAPLG00000014485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044345

12019210 - 12030604

11395

ENSAPLT00000015184

12019210 - 12030592

11383