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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12231070_12235869_F

Intron Information:

Intron Rank:

133901

Intron Class:

major

Intron Phase:

Intron Coordinates:

12231070 - 12235869

Intron Length:

4800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CATGTAATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCCCTGTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

74.3

Major BPS

84.4

0.85

34.5

Major PPT

70.9

0.47

62.5

Minor 5ss

32.5

-2

40.8

45.4

Minor BPS

-0

59.43

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042823

12230004 - 12240811

10808