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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12235945_12240543_F

Intron Information:

Intron Rank:

133899

Intron Class:

major

Intron Phase:

Intron Coordinates:

12235945 - 12240543

Intron Length:

4599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

GTTTGTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

AATACTTTATTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

84.7

0.86

74.3

40.7

Major PPT

66.9

0.38

58.4

43.1

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

55.4

0.16

1.6

63.59

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042823

12230004 - 12240811

10808

ENSAPLT00000040576

12230004 - 12240811

10808