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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1263231_1311850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1263231 - 1311850

Intron Length:

48620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

ATGTGCTGAAGT

Flanking Amino Acid:

SPHPSSPSSSDIGEEAGRSV

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.4

36.4

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

81.7

0.71

0.9

76.2

37.8

Minor 5ss

43.4

-0.7

2.8

56.4

47.7

Minor BPS

49.1

0.01

2.2

71.03

45.7

Associated Gene:

Gene:

ZNF536

Ensembl Gene ID:

ENSAPLG00000013219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013759

1249708 - 1343683

93976

ENSAPLT00000027294

1133042 - 1373085

240044

ENSAPLT00000046286

1133215 - 1421722

288508

ENSAPLT00000026124

1132694 - 1326172

193479

ENSAPLT00000040743

1133042 - 1334633

201592

ENSAPLT00000024577

1249708 - 1315764

66057

ENSAPLT00000029524

1133042 - 1334633

201592

ENSAPLT00000020457

1133042 - 1340131

207090

ENSAPLT00000027507

1249708 - 1346109

96402