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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12736022_12739105_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12736022 - 12739105

Intron Length:

3084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTGCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

CTTAAGGCAAAT

Flanking Amino Acid:

VNDNPPKFPQSVYQMSVSEA

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

82.1

0.72

0.9

77.2

37.1

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

33.7

-1.1

2.6

55.13

46.1

Associated Gene:

Gene:

CDH11

Ensembl Gene ID:

ENSAPLG00000015154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015832

12732673 - 12750842

18170