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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12832427_12840360_R

Intron Information:

Intron Rank:

129517

Intron Class:

major

Intron Phase:

Intron Coordinates:

12832427 - 12840360

Intron Length:

7934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTAGT

5'SS Class:

major

3'SS Sequence:

ATATTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TGCTTGTGAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.3

74.4

41.9

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

80.3

0.68

0.8

78.5

35.1

Minor 5ss

-1.2

2.6

52.1

44.4

Minor BPS

47.4

-0.2

2.1

60.09

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037605

12832244 - 12840651

8408