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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12849644_12869412_R

Intron Information:

Intron Rank:

142725

Intron Class:

major

Intron Phase:

Intron Coordinates:

12849644 - 12869412

Intron Length:

19769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGCTGTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.9

0.79

0.7

81.8

29.4

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

46.2

-0.2

2.3

68.38

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048064

12849122 - 12870084

20963