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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12869476_12870024_R

Intron Information:

Intron Rank:

142726

Intron Class:

major

Intron Phase:

Intron Coordinates:

12869476 - 12870024

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

ATTACAGTAGTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

70.5

0.51

1.3

41.2

Major PPT

85.7

0.8

0.7

84.4

30.5

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

-0.5

2.3

59.83

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048064

12849122 - 12870084

20963