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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12920323_12935758_R

Intron Information:

Intron Rank:

154406

Intron Class:

major

Intron Phase:

Intron Coordinates:

12920323 - 12935758

Intron Length:

15436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ACTGTTTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.8

40.3

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

83.1

0.74

0.9

80.3

37.3

Minor 5ss

37.3

-1.4

3.1

44.3

44.6

Minor BPS

49.5

0.04

1.7

64.47

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040595

12920254 - 12991006

70753