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Intron Name: Anas_platyrhynchos_platyrhynchos_12_12944624_12990197_R

Intron Information:

Intron Rank:

154408

Intron Class:

major

Intron Phase:

Intron Coordinates:

12944624 - 12990197

Intron Length:

45574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CTTGACATAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

89.3

0.88

0.7

88.1

28.9

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

49.6

-0

1.9

64.97

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040595

12920254 - 12991006

70753