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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1314023_1326038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1314023 - 1326038

Intron Length:

12016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGGA

5'SS Class:

major

3'SS Sequence:

TTCTGATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGAATCTAAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.1

40.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

83.9

0.76

0.8

81.1

35.6

Minor 5ss

28.4

-2.5

3.5

38.3

46.7

Minor BPS

49.6

0.05

1.8

67.52

42.6

Associated Gene:

Gene:

ZNF536

Ensembl Gene ID:

ENSAPLG00000013219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028868

1249708 - 1346109

96402

ENSAPLT00000027507

1249708 - 1346109

96402

ENSAPLT00000026124

1132694 - 1326172

193479