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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1314023_1372963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1314023 - 1372963

Intron Length:

58941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGAATCTAAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

83.9

0.76

0.8

81.1

35.6

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

49.6

0.05

1.8

67.52

42.6

Associated Gene:

Gene:

ZNF536

Ensembl Gene ID:

ENSAPLG00000013219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046286

1133215 - 1421722

288508