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Intron Name: Anas_platyrhynchos_platyrhynchos_12_13272676_13311187_F

Intron Information:

Intron Rank:

124464

Intron Class:

major

Intron Phase:

Intron Coordinates:

13272676 - 13311187

Intron Length:

38512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

ATTCAAGGAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

Major BPS

70.6

0.51

73.3

31.3

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

42.3

-0.8

3.1

52.5

46.6

Minor BPS

37.7

-1

2.2

46.75

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030601

13271871 - 13313242

41372

ENSAPLT00000025981

13271871 - 13345837

73967