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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_13469635_13478091_R

Intron Information:

Intron Rank:
144026
Intron Class:
major
Intron Phase:
Intron Coordinates:
13469635 - 13478091
Intron Length:
8457

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GTG|GTAAGTCCT
5'SS Class:
strong_major
3'SS Sequence:
CCTTTGACTTCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTTTGAC
U12 Branch Point Sequence:
TTTCCTTTGACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.5
0.88
0.9
77.1
37.8
Major BPS
74.1
0.6
1
66.7
39.9
Major PPT
77.4
0.62
0.9
73.8
35.5
Minor 5ss
37
-1.5
3
48.7
41.1
Minor BPS
80.7
1.05
1
92.82
28.5

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024732
Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032636
13469543 - 13480192
10650