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Intron Name: Anas_platyrhynchos_platyrhynchos_12_13551057_13562305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13551057 - 13562305

Intron Length:

11249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GCCCCTATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

TGTATCTGACAA

Flanking Amino Acid:

QPYFSIEPHTAIIKTALPNM

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

81.4

32.7

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

67.2

0.39

0.9

58.1

37.2

Minor 5ss

34.6

-1.7

44.4

43.7

Minor BPS

46.3

-0.2

1.8

58.96

40.1

Associated Gene:

Gene:

CDH8

Ensembl Gene ID:

ENSAPLG00000007743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039182

13495574 - 13628504

132931

ENSAPLT00000034736

13495769 - 13626720

130952

ENSAPLT00000026293

13495547 - 13628504

132958

ENSAPLT00000008049

13495574 - 13626894

131321