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Intron Name: Anas_platyrhynchos_platyrhynchos_12_13562474_13566470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13562474 - 13566470

Intron Length:

3997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TCTTATTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTCCTCTTATTC

Flanking Amino Acid:

VNDNPPKFAQSMYHFSVMED

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

73.4

36.4

Major BPS

79.1

0.72

69.3

38.4

Major PPT

75.5

0.57

79.6

32.5

Minor 5ss

38.5

-1.3

3.3

49.1

41.3

Minor BPS

58.2

0.24

1.6

66.92

39.3

Associated Gene:

Gene:

CDH8

Ensembl Gene ID:

ENSAPLG00000007743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034736

13495769 - 13626720

130952

ENSAPLT00000026293

13495547 - 13628504

132958

ENSAPLT00000008049

13495574 - 13626894

131321

ENSAPLT00000039182

13495574 - 13628504

132931