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Intron Name: Anas_platyrhynchos_platyrhynchos_12_13576794_13593510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13576794 - 13593510

Intron Length:

16717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATCTGTTTAACT

Flanking Amino Acid:

HNITIVATETRNHSQVSRVP

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

87.8

0.85

0.6

88.4

21.1

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

67.5

0.63

1.8

81.74

40.3

Associated Gene:

Gene:

CDH8

Ensembl Gene ID:

ENSAPLG00000007743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034736

13495769 - 13626720

130952

ENSAPLT00000026293

13495547 - 13628504

132958

ENSAPLT00000008049

13495574 - 13626894

131321

ENSAPLT00000039182

13495574 - 13628504

132931