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Intron Name: Anas_platyrhynchos_platyrhynchos_12_13626895_13628010_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13626895 - 13628010

Intron Length:

1116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATTTTTTTACCT

Flanking Amino Acid:

AILACIILLLVIVVLFVTLR

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

91.1

28.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.81

0.8

80.4

31.6

Minor 5ss

40.6

-1.1

3.1

59.8

44.7

Minor BPS

69.7

0.7

1.5

85.39

35.1

Associated Gene:

Gene:

CDH8

Ensembl Gene ID:

ENSAPLG00000007743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039182

13495574 - 13628504

132931

ENSAPLT00000026293

13495547 - 13628504

132958