Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_14139502_14143012_R

Intron Information:

Intron Rank:

155194

Intron Class:

major

Intron Phase:

Intron Coordinates:

14139502 - 14143012

Intron Length:

3511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTATTTTGCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

ATGCTCTTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.4

1.09

0.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

70.2

0.46

41.1

Minor 5ss

35.1

-1.7

2.7

41.5

45.1

Minor BPS

53.4

0.09

1.6

61.38

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041175

14138915 - 14143445

4531