Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_14165582_14177402_R

Intron Information:

Intron Rank:

130745

Intron Class:

major

Intron Phase:

Intron Coordinates:

14165582 - 14177402

Intron Length:

11821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

GTTATTACTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TAATTATTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.8

32.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

73.1

0.52

0.9

66.8

39.3

Minor 5ss

46.7

-0.3

2.5

57.4

41.8

Minor BPS

55.7

0.26

1.9

75.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027962

14157622 - 14177914

20293