Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_14185448_14186237_R

Intron Information:

Intron Rank:

144568

Intron Class:

major

Intron Phase:

Intron Coordinates:

14185448 - 14186237

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCAATA

5'SS Class:

major

3'SS Sequence:

TGTTTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTGTCCTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

71.7

40.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

77.8

0.62

0.9

69.5

41.6

Minor 5ss

41.2

-1

3.3

57.4

46.9

Minor BPS

78.4

0.97

1.5

91.78

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037452

14185279 - 14187093

1815

ENSAPLT00000017308

14185279 - 14187831

2553

ENSAPLT00000038123

14184279 - 14187093

2815