About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_14295671_14305866_F


Intron Information:

Intron Rank:
139229

Intron Class:
major

Intron Phase:

Intron Coordinates:
14295671 - 14305866

Intron Length:
10196

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTCGGTTG

5'SS Class:
major

3'SS Sequence:
CATCATTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATGAT

U12 Branch Point Sequence:
GACTCCTGACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.4
0.43
1.2
62.7
44.1

Major BPS
84.6
0.86
1
74
41.2

Major PPT
70.9
0.47
0.9
61.7
39.3

Minor 5ss
35.6
-1.6
3.4
47.2
48.2

Minor BPS
51.6
0.13
1.8
66.76
43.9

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14295572 - 14308455
12884