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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14382574_14420325_F

Intron Information:

Intron Rank:

145813

Intron Class:

major

Intron Phase:

Intron Coordinates:

14382574 - 14420325

Intron Length:

37752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCCATGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TGCATGTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

72.5

0.56

1.2

63.4

Major PPT

60.6

0.24

1.1

60.5

34.7

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

42.5

-0.5

2.2

50.72

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036131

14381928 - 14421204

39277

ENSAPLT00000030781

14381259 - 14421204

39946