Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_14532034_14534212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14532034 - 14534212

Intron Length:

2179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCATCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTCCATCACA

Flanking Amino Acid:

PEWSPGLWSQCSKTCGRGVK

Intron Amino Acid Position:

1008

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

38.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.65

0.8

30.3

Minor 5ss

45.1

-0.5

2.6

45.4

Minor BPS

59.9

0.31

2.1

76.13

41.2

Associated Gene:

Gene:

ADAMTS18

Ensembl Gene ID:

ENSAPLG00000008153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008463

14526069 - 14603252

77184

ENSAPLT00000043475

14525127 - 14603252

78126