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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14534418_14538973_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14534418 - 14538973

Intron Length:
4556

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATA|GTAAGTTCT

5'SS Class:
major

3'SS Sequence:
TTTCTCCGTTAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
GTTTTTCTAATA

Flanking Amino Acid:
KLCNTNPCPAYWSPGEWGAC

Intron Amino Acid Position:
939

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1
76.9
32.3

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
71.3
0.48
1.1
76
32.9

Minor 5ss
44.7
-0.6
2.8
61.4
37.9

Minor BPS
60.7
0.33
1.6
72.09
33.9

Associated Gene:

Gene:
ADAMTS18

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14525127 - 14603252
78126

14526069 - 14603252
77184