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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14539101_14540627_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14539101 - 14540627

Intron Length:
1527

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAGGTAAC

5'SS Class:
major

3'SS Sequence:
AATACTTCCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TTTTTTCTAATA

Flanking Amino Acid:
QSECSATCGGGHITTKAICL

Intron Amino Acid Position:
897

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.8
0.66
1.1
72.3
39.5

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
65.2
0.34
0.9
58.5
37.4

Minor 5ss
34.2
-1.8
3
36.5
40.9

Minor BPS
66.6
0.52
1.6
79.19
30.8

Associated Gene:

Gene:
ADAMTS18

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14525127 - 14603252
78126

14526069 - 14603252
77184