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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14540770_14552353_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14540770 - 14552353

Intron Length:
11584

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAA|GTAAGCTTT

5'SS Class:
strong_major

3'SS Sequence:
TACCCCTCTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACAAAA

U12 Branch Point Sequence:
TTTTCCCAAACA

Flanking Amino Acid:
GPTNETLVFEILLQGKNPGI

Intron Amino Acid Position:
850

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
1
81.6
33.2

Major BPS
51.5
0.04
0.9
57.3
24.9

Major PPT
71.1
0.47
0.8
62.4
34.3

Minor 5ss
55.3
0.18
2.7
73.8
36.4

Minor BPS
66.4
0.51
2
84.22
35.9

Associated Gene:

Gene:
ADAMTS18

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14525127 - 14603252
78126

14526069 - 14603252
77184