Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_14553937_14554075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14553937 - 14554075

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGTAT

U12 Branch Point Sequence:

AGTCCTTTACTT

Flanking Amino Acid:

YDVCIDGICEQVGCDHGLGS

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

76.7

27.4

Major BPS

59.2

0.23

1.4

61.1

45.5

Major PPT

82.1

0.72

0.9

76.3

37.7

Minor 5ss

-1.2

3.1

47.5

42.5

Minor BPS

0.33

1.6

72.38

38.8

Associated Gene:

Gene:

ADAMTS18

Ensembl Gene ID:

ENSAPLG00000008153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043475

14525127 - 14603252

78126

ENSAPLT00000008463

14526069 - 14603252

77184