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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14563091_14564116_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14563091 - 14564116

Intron Length:
1026

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACCTATT

5'SS Class:
major

3'SS Sequence:
TTTCTCTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTATGAT

U12 Branch Point Sequence:
AGTTCTATGATA

Flanking Amino Acid:
AKVCNLSFVKDICKSLWCHK

Intron Amino Acid Position:
544

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.7
0.63
1.2
82
38.1

Major BPS
72.3
0.55
1.1
63.4
42.8

Major PPT
93.6
0.98
0.6
92.4
17.8

Minor 5ss
46.1
-0.4
2.9
68.9
41.7

Minor BPS
55.3
0.16
1.6
66.04
33.8

Associated Gene:

Gene:
ADAMTS18

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14525127 - 14603252
78126

14526069 - 14603252
77184