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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14572338_14574998_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14572338 - 14574998

Intron Length:
2661

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTATGTAAG

5'SS Class:
major

3'SS Sequence:
ATTTCCTTTTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTTTTAT

U12 Branch Point Sequence:
CTTCCCCAAACT

Flanking Amino Acid:
KQHFCGRRKKYAPKPPTEET

Intron Amino Acid Position:
263

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.1
72.6
38.2

Major BPS
78.7
0.71
1.2
71.7
44.6

Major PPT
83.8
0.76
0.7
82
29.1

Minor 5ss
43.6
-0.7
2.6
55
42.6

Minor BPS
54.5
0.22
2.1
78.26
43.7

Associated Gene:

Gene:
ADAMTS18

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14525127 - 14603252
78126

14526069 - 14603252
77184