Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_14601026_14602913_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14601026 - 14602913

Intron Length:

1888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TTTATCGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTTTTTATCG

Flanking Amino Acid:

DSISISELNHDYVFVTPVKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.2

73.6

36.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.7

0.74

0.9

76.4

37.6

Minor 5ss

41.9

-0.9

2.5

49.3

41.1

Minor BPS

56.9

0.08

1.7

60.55

42.1

Associated Gene:

Gene:

ADAMTS18

Ensembl Gene ID:

ENSAPLG00000008153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043475

14525127 - 14603252

78126

ENSAPLT00000008463

14526069 - 14603252

77184