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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14739983_14743711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14739983 - 14743711

Intron Length:

3729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGATTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

TCTCCCTTGATT

Flanking Amino Acid:

ALGDSVKGFEIGDRVMAFVN

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

71.5

0.53

1.1

43.2

Major PPT

71.2

0.48

0.9

65.4

34.8

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

75.7

0.89

1.1

84.59

36.2

Associated Gene:

Gene:

VAT1L

Ensembl Gene ID:

ENSAPLG00000009070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009439

14734767 - 14786532

51766

ENSAPLT00000043395

14734767 - 14786075

51309