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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14743928_14755634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14743928 - 14755634

Intron Length:

11707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GATATGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TGTCAGTGAACT

Flanking Amino Acid:

VLVHSAGGGVGQAVAQLCST

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

70.7

0.47

62.2

43.9

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

47.4

-0.1

2.3

72.75

43.2

Associated Gene:

Gene:

VAT1L

Ensembl Gene ID:

ENSAPLG00000009070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043395

14734767 - 14786075

51309

ENSAPLT00000009439

14734767 - 14786532

51766