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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14756810_14758078_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14756810 - 14758078

Intron Length:

1269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

CATGTATTAACT

Flanking Amino Acid:

LKPLGTYILYGSSNMVTGET

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.2

35.8

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

0.79

0.8

79.6

32.2

Minor 5ss

26.7

-2.7

28.5

38.4

Minor BPS

58.3

0.34

1.7

73.68

43.1

Associated Gene:

Gene:

VAT1L

Ensembl Gene ID:

ENSAPLG00000009070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043395

14734767 - 14786075

51309

ENSAPLT00000009439

14734767 - 14786532

51766