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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14758135_14759758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14758135 - 14759758

Intron Length:

1624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TATTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTTTTCTAAACC

Flanking Amino Acid:

TKSFFSFAKSWWQVEKVNPI

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

85.8

0.81

0.8

77.5

36.4

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

75.7

0.79

1.6

85.68

32.7

Associated Gene:

Gene:

VAT1L

Ensembl Gene ID:

ENSAPLG00000009070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043395

14734767 - 14786075

51309

ENSAPLT00000009439

14734767 - 14786532

51766