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Intron Name: Anas_platyrhynchos_platyrhynchos_12_14821494_14823531_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14821494 - 14823531

Intron Length:
2038

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGGGCC

5'SS Class:
major

3'SS Sequence:
TTTTCTCCTACAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
AATTTTTTAATC

Flanking Amino Acid:
TTRDGWVYYANHLEEKTQWE

Intron Amino Acid Position:
36

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.6
0.67
1
71.8
33.5

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
90
0.9
0.6
84.8
23.1

Minor 5ss
32.2
-2
3.6
42.5
38.7

Minor BPS
72.2
0.68
1.1
73.2
31.2

Associated Gene:

Gene:
WWOX

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14821387 - 14948436
127050

14821387 - 14978243
156857