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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1518971_1529228_R

Intron Information:

Intron Rank:

153375

Intron Class:

major

Intron Phase:

Intron Coordinates:

1518971 - 1529228

Intron Length:

10258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGAAT

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

TTTTGTTTGTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.2

37.1

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

88.8

0.87

0.7

88.9

28.2

Minor 5ss

40.1

-1.1

3.2

47.4

Minor BPS

42.8

-0.4

3.6

78.01

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023329

1517683 - 1532021

14339