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Intron Name: Anas_platyrhynchos_platyrhynchos_12_15327334_15327874_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15327334 - 15327874

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCTTAAAAA

5'SS Class:

weak_major

3'SS Sequence:

TTTTTAATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

WSAQVNFVREQQGAATTVYC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.9

0.24

1.3

37.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.6

0.87

0.8

86.6

31.3

Minor 5ss

24.3

-3

3.6

31.4

42.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047946

15327211 - 15328063

853