About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_15611614_15628651_R


Intron Information:

Intron Rank:
151071

Intron Class:
major

Intron Phase:

Intron Coordinates:
15611614 - 15628651

Intron Length:
17038

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTAAGTTGA

5'SS Class:
major

3'SS Sequence:
TTGATTTTAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTGATTTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.61
1
69.1
38.5

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
77.2
0.61
1
73.4
40.7

Minor 5ss
41.8
-0.9
2.8
54.8
43.5

Minor BPS
70.8
0.65
1.2
75.26
36.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15611096 - 15628844
17749

15611096 - 15628844
17749