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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16171012_16172863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16171012 - 16172863

Intron Length:

1852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

TTTAGGATAAAA

Flanking Amino Acid:

VKEMASCSAVVLEESKCLVR

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

77.9

36.3

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

73.2

0.52

70.2

41.3

Minor 5ss

-1.7

3.2

42.5

Minor BPS

41.5

-0.6

2.6

62.42

43.3

Associated Gene:

Gene:

CDYL2

Ensembl Gene ID:

ENSAPLG00000009316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009701

16118282 - 16173022

54741